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Evolution 2019: Urbanization Across the Radiation

Anoles throughout the Caribbean are found in urban environments and differ in the extent to which they utilize anthropogenic habitats. There is strong phylogenetic signal in urban tolerance but is not correlated with ecomorphology of anole species. Previous work by Dr. Kristin Winchell (currently a postdoctoral researcher at Washington University in St. Louis with Dr. Jonathan Losos) and collaborators  showed that Anolis cristatellus commonly uses anthropogenic perches (e.g.- buildings and fences) in urban habitats, and that A. cristatellus has repeatedly adapted to urban environments. Urban A. cristatellus have longer limbs and greater numbers of lamellae when compared to their more rural counterparts, a pattern that is repeated island-wide.

With the prediction that species within the same ecomorph class would adapt to urban environments similarly, sampling has begun with four species from the Greater Antilles. Three species belong to the trunk-ground ecomorph (Anolis cybotes, Anolis lineatopus, and Anolis sagrei) and one trunk-crown species (Anolis grahami). In the Bahamas, examining Anolis sagrei she found significant shifts in relative limb length but in the opposite direction as seen in A. cristatellus. Meaning that urban A. sagrei have relatively shorter limbs, but it is worth noting that they have longer absolute limb length along with larger body sizes. Preliminary analyses of Anolis cybotes (Dominican Republic) and Anolis grahami (Jamaica), suggest shifts in relative and absolute limb lengths consistent with the morphological differences found in urban A. cristatellus. In Anolis lineatopus, the suggested shifts in relative and absolute limb length are consistent with those shifts seen in A. sagrei.

Additionally, Kristin had all of us at the conference beat when it came to attire. Her Anolis lineatopus dress that she designed the art work for was spectacular. If you are interested in her Anolis and urban stickers and art– check out her work on RedBubble— all proceeds from her art goes to printing more stickers for outreach purposes in the communities she does her field research in.

Excellent job Kristin and we are all looking forward to learning more about this work!

Evolution 2019: On the Origin of Anolis Sex Chromosomes

The origin and maintenance of reproductive isolation between species is a central question to evolutionary biologists. Divergent sex chromosomes can play an important role in this process, and are generally assumed to have outsized importance in the establishment of reproductive barriers. Studying the origin and evolution of sex chromosomes – and their respective fusions and fissions – may therefore provide key insights into their role in these processes.

Anole are known to vary in sex chromosome size and content, although all anoles are male heterogametic. In a poster at Evolution, de Mello et al. investigate the neo-sex chromosomes of Anolis distichus, one of the “model anoles” of speciation research. Starting from a newly assembled genome, these researchers used differences in coverage, k-mer comparisons, and synteny mapping to the Anolis carolinensis genome, to identify the sex-linked genomic regions of A. distichus.

From these results, de Mello et al. were able to identify deep conservation of the X chromosome between A. distichus and A. carolinensis – implying an ancient origin of a shared anole X chromosome. They also identified explicitly Y-linked scaffolds for the first time in any Anolis species, which will prove useful for future work on the evolution of these sex chromosomes. However, perhaps most excitingly, de Mello et al. identified a chromosome fusion of the Anolis carolinensis microchromosomes 11 and 12 to the A. distichus X chromosome. In other words, the A. distichus  X chromosome has expanded through the fusion of these two microchromosomes.

de Mello et al.’s  result that the  A. distichus sex chromosomes are simultaneously ancient and newly expanding provides a fascinating look at the dynamic lives of these sex chromosomes. Future investigations into the evolution of Anolis sex chromosomes will surely prove fruitful to understanding their role in the diversification of the Anolis lineages.

Evolution 2019: How Many Species of Anolis distichus?

Anolis distichus is a highly variable species from Hispaniola. It’s especially variable in its dewlap color, ranging from white, to orange, to red. In the past, A. distichus has been broken up into 16 subspecies based on its dewlap variation! Previous work by Rich Glor and his students used genetic data to identify six candidate species, although these six candidate species didn’t correspond well with the 16 dewlap-based subspecies.  In order to get a better handle on how justified these candidate species are, undergraduate Tanner Myers, working with Pietro Longo Hollanda de Mello and Rich Glor, from the University of Kansas, presented a poster titled Identifying species when boundaries are blurred.

Myers collected morphological data from populations of A. distichus from across Hispaniola. The authors expected their morphological data to also partition along with the previously identified genetic candidate species. They found this to not be the case!  When the authors looked at their morphological data (linear body, limb, and head measurements), to see if these 6 candidate species had any morphological divergence, they found no strong pattern. All of the candidate species clustered together to support one morphological group. In the end, the authors suggest that Anolis distichus may represent a highly variable group in in the early stages of speciation, but at this point, they do not support any taxonomic revisions of the species.

Tanner Myers will be starting graduate school with Jamie Oaks at Auburn University in the fall.

New Records of Festive Anole Populations on Pacific Coast of Mexico and in Panama

Anolis sagrei now established on the Pacific coast of Mexico.

Anolis sagrei, the brown or festive anole, continues its march through Central America (see previous posts on the species elsewhere in Mexico and in Costa Rica, not to mention South America). New reports reveal populations on the Pacific coast of Mexico (figures above and below) and in Panama City. Where next?

Weird Lizard with Three-and-a-Half Legs

stumpy in bag

Periodically here on Anole Annals, we have posts about three-legged lizards. The most recent such post was last year from Miami. Here’s another lizard, with a twist: it’s got four legs, sort of. Looking at the floppy left hindleg of this lizard, caught in the Bahamas two years ago. An x-ray confirms that this is odd–there’s no bone in most of that limb! I’ve never seen anything like it, and wonder how it happened.

xxx

Despite this seeming impediment, the lizard looked quite healthy, and as the video shows, could run quite adeptly up a note pad.

And here she is when we released her back at the place where we caught her. Pretty nimble!

Video courtesy Buddy and Cindy Pinder.

Anoles in the New Yorker!

Evolution 2019: Coming Soon!

It seems hard to believe almost a year has passed since the last Evolution meeting. Last year we brought you coverage of the anole talks and posters in Montpelier, France. This year, we’re coming to you live from Providence, Rhode Island from June 22nd – 25th! This year there are eight talks and eight posters scheduled *(searching the schedule for keywords “anole” and “Anolis“). There’s some pretty fascinating topics on the schedule – here’s what you have to look forward to each day:

Saturday: 

  • Habitat use, competition, and phylogenetic history shape the evolution of claw morphology in Lesser Antillean anoles (Yuan, Jung, Wake, Wang)
  • Estimating premating isolation among allopatric Anolis sagrei populations (Poster board #152) (D’Agostino, Geneva, Donihue, Losos)
  • Morphological assessment reveals candidate species of Anolis lizards to be truly cryptic (Poster board #175) (Meyers, de Mello, Glor)

Sunday:

  • Mountaintop endemics and climate change: is warming always a problem? (Farallo, Muñoz)
  • Sexual signal diversity and population genetic structure in Amazonian anole lizards (Prates, D’Angiolella, Melo-Sampaio, Rodrigues, de Quieroz, Bell)
  • The effects of volcanic activity on the phylogeographic history of the Plymouth Anole, Anolis lividus, on Montserrat (Poster board #72) (Jung, Yuan, Wang, Frederick)
  • Identification and assembly of an anole sex-chromosome: Rapid degeneration since autosomal fusion? (Poster board #160) (de Mello, Hime, Glor)
  • Effects of urbanization on toe pad shape and lamellae size in Anolis cristatellus (Poster board #174) (Howell, Hagey, Winchell)

Monday: 

  • Using archival DNA to elucidate anole phylogeny (Mayer, Gamble)
  • Comparative landscape genetics and epigenetics of two trunk-ground anoles (Wang, Wogan, Yuan, Mahler)
  • Ancient hybridization in the adaptive radiation of Anolis lizards on Puerto Rico (Wogan, Yuan, Wang)
  • Urban adaptation in anole lizards of the Greater Antilles (Poster board #7) (Winchell)
  • Cities in the Spotlight: Does Tolerance of Artificial Light at Night Promote Urban Invasions? (Poster board #97) (Thawley, Kolbe)
  • Sex-specific mortality and senescence in a wild population of brown anole lizards (Poster board #102) (Reedy, Kahrl, Seears, Wittman, Bhave, Cox, Schwartz)
  • Adaptive radiation in the multidimensional phenotype (Bodensteiner, Muñoz)
  • Patterns of morphological diversity in Draconura clade anole lizards (Huie, Prates, Bell, de Quieroz)

 

Did we miss any? If so, let us know in the comments so we can be sure to add it to our schedules! We will be live blogging the meeting as usual, so check back starting June 22nd to hear about the latest in anole evolutionary research. And if you are attending the meeting, consider blogging a talk or poster for us (new contributors welcome!). Just send me an email and I will fill you in on all you need to know.

Are There Solitary Mainland Anolis Lizards?

Anolis (Phenoacosaurus) heterodermus, a mainland anole that co-occurs with few or no other anole species

One of the most important questions in ecology and evolution is about the role of biotic interactions in driving phenotypic and behavioral changes across species. The insular Anolis species are a good model to address this kind of question due to their high abundance and pervasive ecological interactions across islands. Some insular species, however, live in isolation on small islands across the Pacific and Caribbean islands (21 species). These species have evolved similar morphologies across islands. For instance, Poe et al (1) found that body size evolved by exaptation (remember the classic Gould and Vrba 1982 paper) to colonize these small (and depauperate) islands successfully. By contrast, Poe et al. (1) showed that sexual size dimorphism (SSD) evolved by adaptation likely after island colonization to minimize intraspecific competition.

In brief, these solitary insular anoles evolved phenotypic (body size and SSD) traits by two different processes. Cool! But, what happens in mainland areas? Much work has been devoted to Caribbean species, but the mainland offers many more species and very little research has been conducted there to understand ecological and evolutionary processes. So, we decided to establish whether solitary ecology can be extended to mainland species or whether it is an island ecological phenomena.

The first problem that we had to resolve was trying to establish whether mainland species tend to live in geographical/ecological isolation as insular species. We adopted a novel concept in macroecology (the diversity field concept) developed by Mexican macroecologists (Hector Arita and Fabricio Villalobos see 2, 3) implemented here using extensive distributional information for almost all known Anolis species (377 spp), which I generated during my Ph.D. thesis (see 4 for an example using these maps). The diversity field concept allows us to establish how many species co-occur with a given species across its geographic range.

We calculated how many congeners can co-occur within the distributional area of each Anolis species using the range maps (see figure below). We divided mainland species into two groups: those co-occurring with few congeners (i.e., “solitary-like”, I had to say that his term did not like to reviewers, so we used a “species-poor” forms in the paper). Then, we test whether these “solitary-like” mainland species are different from other mainland species using a randomization approach. Our results revealed that “solitary-like” mainland species exhibit different traits from random mainland assemblages. These unique traits (i.e., uniform body size and greater SSD) suggest that solitary ecology from insular anoles can be extended to mainland settings.

 

field_diversity

Figure. Diversity fields for some Anolis species. Note that the diversity field is the set of richness values of co-occurring anoles inside each distributional area.

The next question was focused to establish whether similar (ecological and evolutionary) processes affected body size and SSD patterns in a similar way. We found that the phylogenetic position of body size and SSD shifts did not coincide and also with the evolutionary transitions to solitariness (i.e., reduced level of sympatry). We suggested that both traits are decoupled across the entire Anolis radiation and likely that both traits evolved exaptatively. In other words, it is possible to think that “solitary-like” species retained body size and SSD from their most recent common ancestors to facilitates the lonely life.

The paper is very short (less than 2500 words) and was published in the May number of Biology Letters(5).

 

The Behind-the-Scenes Story of the Recent Nature Paper on Lizard Competition and Predation

In the most recent issue of Nature Ecology & Evolution, first-author Rob Pringle gives the inside skinny on the recent paper about the interaction of predation and competition among lizards (see the video description of the study).

Herewith, the essay:

I was heavily influenced by a handful of papers that were published during my first few years of graduate school. Some of these — Fine et al. (2004) on how herbivores promote habitat specialization in trees, Rooney et al. (2006) on food-web structure and stability — resonated because I could connect them to problems that I was working on. Others, such as Schmitz et al. (2004) on the ecological importance of predator-avoidance behavior, made an impression because they seemed to herald seismic shifts in the outlook of community ecology. And then there was a set of papers that captivated me with their sheer elegance: beautifully designed and executed field experiments that inspired me and made me jealous.

A string of papers by Tom Schoener, Dave Spiller, and Jonathan Losos belonged to this last category. There was a new one each year, with titles like “Predator-induced behaviour shifts and natural selection in field-experimental lizard populations” (2004) and “Island biogeography of populations: an introduced species transforms survival patterns” (2005). These studies used tiny cays in the Bahamas as arenas for a simple yet powerful experiment. On some islands, the investigators had introduced top predators — curly-tailed lizards (Leiocephalus carinatus), which occurred naturally on larger islands just a few stone-throws away from the experimental islands. A major aim of this work was to understand how the introduced predators affected populations of brown anoles (Anolis sagrei), which were native to the experimental islands.

The results were dramatic. Curly-tailed lizards are stocky, ground-dwelling animals, and they devastated brown-anole populations. The brown anoles that survived did so by climbing into the vegetation, beyond the reach of the curly-tails, and this behavioral shift was associated with  natural selection on hindlimb length — an evolutionary consequence of predator-avoidance behavior. When I was a kid, we used to play a game called ‘the floor is lava’; if your feet touched the ground, you were dead. It seemed kind of like that for the brown anoles on these islands.

Brown anole and curly-tail
Left: Brown anole. Right: curly-tailed lizard. Photos: Jonathan Losos and Kiyoko Gotanda.

When I started a post-doc at the Harvard Society of Fellows in 2009, I met Losos and we started discussing ideas for a new experiment. I thought that a minor innovation on the earlier experiments could open up new conceptual territory. Losos said that he’d been wanting to do the same thing for years. To wit: if we introduced not just curly-tailed lizards, but also a second species of anole — green anoles (Anolis smaragdinus) — then we could ask questions about predation, competition, and the interaction between the two. Among other things, this design would enable us to test classic ideas about how predators affect the ability of competing prey species to coexist.

Green anole
Green anole, characteristically perched on a thin branch in the canopy.

The risky thing about this idea was that so much of it had already been done to one degree or another. Previous work had painted a rich picture of the interaction between curly-tailed lizards and brown anoles — our odds of discovering something new on that front were low. And there were dozens of studies about competition between sympatric Anolis lizards. The novelty of our approach hinged on the interaction between predation and competition, which was a thin thread on which to hang such a massive undertaking. But I felt supremely confident that the experiment would work. Todd Palmer, Rowan Barrett, and a raft of other collaborators must have been confident too, because they joined me in setting up and monitoring the experiment.

Islands
Left: Aerial view of island 926; at left is a larger island, similar to those where we collected green anoles and curly-tailed lizards for introduction onto the experimental cays. Right: Naomi Man in ‘t Veld conducts a population census; squirt guns with water-soluble paint were used to mark lizards from a distance. Photos: Day’s Edge Productions and Kiyoko Gotanda.

By 2013, two full years into the study, my confidence was giving way to panic. I had started a job as an assistant professor in 2012; I was anxious about my professional survival, and I had ploughed large amounts of time and money into an experiment that did not seem to be working after all. The introduced curly-tailed lizards were firmly established in their new homes, and the brown anoles were responding by becoming more arboreal, as previous work had indicated they would. But the introduced green-anole populations seemed to be struggling. It looked as if they might die out, in which case our experiment would amount to a very expensive confirmation of the earlier work by Schoener, Spiller, and Losos. Our project had some original twists — Tyler Kartzinel was spearheading an effort to monitor the lizards’ diets using DNA metabarcoding — but it wasn’t at all clear that we would discover anything new or noteworthy.

Our break came in 2014, when it became clear that the green-anole populations were indeed thriving on some islands — just not on any of the islands with curly-tailed lizards. When we returned to the Bahamas in 2015, buoyed by the emerging results and freshly funded by the US National Science Foundation, we found that green anoles had disappeared on one island with curly-tailed lizards (the largest such island). Sometime during 2016, a second green-anole population vanished, this time from the smallest island with curly-tailed lizards. That left just two islands where green anoles still persisted in the presence of curly-tails, and one of those populations looked like it might soon join the list of casualties. Was this because the curly-tailed lizards were simply eating the green anoles to extinction on those islands? Probably not. The green anoles were highly arboreal; they rarely descended to the ground and instead moved by scampering through the twigs and leaves in the canopy. The chunky curly-tailed lizards, by contrast, lumbered across the ground, rarely climbing higher than 50 centimeters — and then only on the thickest of tree trunks. Indeed, the curly-tails didn’t seem to be eating many lizards of any kind. We saw them feasting on cockroaches, and occasionally snacking on fallen fruits and dead hermit crabs, but it wasn’t until 2016 that we finally saw one eat a small female brown anole. Isotopic analysis revealed that curly-tailed lizards actually occupied a slightly lower trophic position than did either anole species, which suggested that the top predator was subsisting more on insects than on other lizards.

Curly-tail and green anoles
Left: Curly-tailed lizard eating a cockroach; the lizard’s paint marks signify that it had been seen on the first two days of the three-day population census. Center: Mating green anoles were a welcome sight in 2013. Right: Green anole clinging to a thin twig, where we often found them, especially on islands with curly-tails. Photos: Kiyoko Gotanda and Rowan Barrett.

The more plausible explanation for our results was that the presence of curly-tailed lizards intensified competition between the two anole species within the predator-free arboreal refuges, and that this competition — not direct predation — was the primary reason why the introduced green-anole populations failed to increase on islands with curly-tailed lizards. Molecular analysis of fecal samples subsequently reinforced this impression. DNA metabarcoding produced evidence that curly-tailed lizards exacerbated the competition between brown and green anoles for insect prey. And a quantitative PCR assay — conducted by Charles Xu at the behest of one of the four very thoughtful reviewers for Nature — detected the DNA of brown and green anoles in just 4% of the curly-tailed lizards that we sampled. Curly-tailed lizards really were the top predators; they just didn’t catch anoles very often.

We concluded that indirect effects of the top predator destabilized the coexistence of competing prey species. In the landscapes of fear created by curly-tailed lizards, the clear niche partitioning exhibited by brown and green anoles on predator-free islands — a product of adaptive radiation — was no longer evident. Instead, these species were trapped together in the top story of the small islands, competing for the same space and food, afraid of getting burned by the hungry predators on the ground. Green anoles, despite being better adapted to arboreal life, got the shorter end of the stick (both literally and figuratively). This might be because brown anoles, as the incumbents on the islands, had greater strength in numbers. If we had introduced both brown and green anoles at identical starting numbers, would the green anoles have come out on top? Or, now that the combination of competition and predation has greatly diminished brown-anole populations, might green anoles stage a comeback? In 2018, we reintroduced green anoles on the two islands where they had been extirpated, with the hope of answering this question.

In any event, our findings ran counter to one of the motivating hypotheses of the project. Early studies, notably Bob Paine’s classic experiment in the rocky intertidal habitats of Makah Bay, suggested that predators tend to ameliorate competition between species at lower trophic levels by preventing any one species from becoming too abundant and excluding the others. Many ecologists, myself included, love this idea of ‘keystone predation’. Not only is it an elegant concept, but it also validates top predators as linchpins of ecological integrity. But when can we expect predators to play this role? In rocky intertidal communities, where keystone predation is a powerful force, sea stars feed on sessile invertebrates; but prey that are attached to the substrate have a limited ability to escape predators in space. In predator-prey interactions involving fast-moving prey that can rapidly adjust their behavior to avoid predators, I would expect keystone predation (sensu stricto, as opposed to the broader concept of ‘keystone species’) to be infrequent, and competition for enemy-free space to be both frequent and strong.

Boating
Left: The crew of the Sand Crab prepares to disembark on an island (from left: Naomi Man in ‘t Veld, Todd Palmer, Rowan Barrett, Tim Thurman). Center: When the Sand Crab got stuck at low tide, we had to walk (from left: Palmer, Pringle). Right: When the seas were rough, we contemplated our own mortality (from left: Palmer, Man in ‘t Veld, Pringle, Thurman). Photos: Kiyoko Gotanda and Rowan Barrett.

It has now been almost a decade from the conception to the publication of this work. What started out as a post-doc project has become an enduring annual ritual, and one that I have (usually) been able to enjoy thanks to a talented group of collaborator-friends: Palmer, Barrett, Kartzinel, and Xu, along with Tim Thurman, Kena Fox-Dobbs, Matt Hutchinson, Tyler Coverdale, Josh Daskin, Dominic Evangelista, Kiyoko Gotanda, Naomi Man in ‘t Veld, Hanna Wegener, and Jason Kolbe — and, of course, Schoener, Spiller, and Losos.

Fieldwork
The research team left it all on the field. Tim Thurman (left) required stitches after one nasty fall; later (center), he was possibly sick (or simply didn’t want anybody to steal his water). Todd Palmer (right) was forced to become arboreal in his search for green anoles. Photos: Rowan Barrett and Kiyoko Gotanda.

The interdisciplinarity of this team enabled what is to me the most satisfying feature of our work. We were fortunate to have access to a replicated set of small cays on which to manipulate species composition. That is a rare opportunity and would have made for a nice study in itself. But by also integrating molecular assays (to quantify diet composition and intraguild predation) and stable-isotope analyses (to quantify trophic position and food-chain length), we were able to gain deeper insight into the mechanisms underlying the population dynamics. Indeed, without these additional assays, our suppositions about the relative importance of consumptive and non-consumptive effects would have been equivocal at best. Molecular techniques have fully entered the mainstream of ecology over the past decade, yet they are still rarely paired with the kind of manipulative field experiments that so inspired me as a first-year graduate student. The fusion of sound natural history, rigorous experimentation, and forensic mechanistic exploration offers tremendous power to resolve the kind of messy complexity that has long frustrated ecologists.

Predators Alter Interactions between Green and Brown Anoles: an Experimental Study

New paper in Nature examines the interaction between green anoles and brown anoles, and how the presence of the predatory curly-tailed lizard changes the balance.  See also the commentary by Os Schmitz.

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