Author: Jonathan Losos Page 32 of 129

Professor of Biology and Director of the Living Earth Collaborative at Washington University in Saint Louis. I've spent my entire professional career studying anoles and have discovered that the more I learn about anoles, the more I realize I don't know.

The Year in Anoles: AA 2015

As 2015 comes to an end, now is a good time to reflect on the year in Anole Annals. Fortunately, our good friends at WordPress have provided us with a nice summary.

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For all the details on how things went down on Anole Annals in 2015, check out WordPress’s full report.

50% Off Anole Calendars

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That’s right, the sale you’ve putting waiting for on zazzle.com: 50% off calendars through Monday. That’s $11 per calendar. You can’t afford not to buy one…or two. Use the code SAVEAFTRXMAS.

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While you’re shopping on zazzle, check out the Anole Annals store there. Everything’s on sale for at least 20% off, including the ecomorph line of watches, ties, playing cards and more.

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New Paper on the Introduced Reptiles and Amphibians of Cuba

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At last we’ve found a place in the Caribbean that Anolis sagrei hasn’t invaded: Cuba! Because, of course, A. sagrei is native there, as well as 63 other species of anoles. In fact, there are no introduced anoles on Cuba, which is quite unusual. There are, however, a number of other herps that have invaded there, as a recent paper in Herpetological Conservation and Biology by Borroto-Páez discusses. Here’s the abstract:

The number of introductions and resulting established populations of amphibians and reptiles in Caribbean islands is alarming. Through an extensive review of information on Cuban herpetofauna, including protected area management plans, we present the first comprehensive inventory of introduced amphibians and reptiles in the Cuban archipelago. We classify species as Invasive, Established Non-invasive, Not Established, and Transported. We document the arrival of 26 species, five amphibians and 21 reptiles, in more than 35 different introduction events. Of the 26 species, we identify 11 species (42.3%), one amphibian and 10 reptiles, as established, with nine of them being invasive: Lithobates catesbeianus, Caiman crocodilus, Hemidactylus mabouia, H. angulatus, H. frenatus, Gonatodes albogularis, Sphaerodactylus argus, Gymnophthalmus underwoodi, and Indotyphlops braminus. We present the introduced range of each of the 26 species in the Cuban archipelago as well as the other Caribbean islands and document historical records, the population sources, dispersal pathways, introduction events, current status of distribution, and impacts. We compare the situation of introduced herpetofauna in Cuba with that in other Caribbean islands. We also document impacts, areas of missing information, and possible directions for future research. The paper contributes a systematic review as well as new knowledge for national and international agencies and databases. This information is critical for use in conservation, management, and eradication. Additionally, it alerts management authorities as to specific pathways of introduction for proactive action, which may be used to avoid potential introductions.

How R Has Changed How We Look at Principal Component Analyses

A typical PCA table that I trawled from the internet.

This post isn’t really very anole-specific, but because lots of studies of anoles use principal component analyses, I think it’s at least tangentially relevant.

PCA is a way of to reduce the variation in a data set to a few dimensions by constructing new variables that combine variables that are highly correlated with each other into a smaller number of variables called PC axes. I won’t go into the details of the method here, because Ambika Kamath explains all in a post she wrote on her blog a while back.

What I want to mention here is how we interpret these new statistical axes. Back in my day, computer programs spit out a matrix of numbers like the one above, which we called “loadings.” These values represented how strongly an individual’s value for each variable was correlated with the individual’s score on the new axes. So, for example, in the table above, values on PCA axis one correlate most strongly with an individual’s values for the top four variables (sodium, calcium, magnesium and chloride concentrations) and most weakly with melt percentage and some other variables.

Now, everyone uses the computer program R to conduct PCAs, and R, too, spits out “loadings.” But those are not your father’s loadings (or my loadings). Rather, those values are the coefficients of the new equation that defines the PCA axis (a PCA axis is a linear regression of all the variables). Thus, in the example above, individuals that scored high on PCA 1 would have the largest largest concentrations of the top four variables; an individuals melt percentage would have little impact on an individual’s score on PC I. Back in the day, we could also access those values, but we called them “coefficients.”

Does this really matter? Only to the extent that what much of the literature used to call “coefficients” is now called “loadings” and what used to be called “loadings” apparently isn’t routinely spit out by R. And, more importantly, most R users are completely unaware of the switcheroo.

Ambika did a very preliminary analysis to see whether the values of coefficients (new “loadings”) and correlations (old “loadings”) are very different. Her tentative conclusion is that they aren’t, so maybe this doesn’t matter much, but it might be worth looking into more.

Reflections on the Shape of Lizard Eggs and Life

Elsewhere on Anole Annals, Silas Ginn responsed to a question about what shape anole eggs have. I believe his response deserves a wider audience and so am putting it up here as its own post:

Indeed, anole eggs are long and skinny when they’re laid. But due to their leathery flexible skin, they can expand like a balloon and will grow with age and moisture. I’ve only got experience with Knight anoles, green anoles and probably four or five types of different brown anoles, but they’re all about the same – except that the Knight anoles HATCH at the same size as a green or brown anole.

As for hatchlings of green or browns, they’re so tiny it’s just remarkable! My old workplace was “infested” with a few species of geckoes (in Calgary Alberta, Canada – of all places!) and the baby geckoes popped up all over the place, especially in the filing cabinets where they obviously preferred to lay their eggs between pieces of paper, due to their being hidden & protected so well.

But yeah, at one point I brought in some house-plants – this was a huge ware-house complex where we ran an aquarium fish and reptile importer supplying Western Canada’s pet-shops, plus an outlet to the public, and a custom tank building shop in the back, quite a lot of space and amounting to more than 700 aquariums all told – and the whole place with 35-40ft ceilings and kept at upwards of 30-degrees Celcius all of the time, naturally humidity was such that it actually RAINED inside of the place on a regular basis – a problem in that it brought down the decades-old asbestos spray-on fire retardant insulation material from the ceilings – but we had some very nice sky-lights as well, if it had been kept up better it would’ve made a fantastic space well I mean really fantastic ’cause I loved it even WITH the dust and cockroaches ha-ha.

ANYWAY yeah I brought in some house-plants to liven the place up – should’ve left ’em when I moved on, ’cause they’ve all died since. There was a huge Munstera deliciosa “swiss-cheese plant” which I potted up on top of overhead wooden beams that had been there for decades, as some type of over-head system for a belt-driven power supply back when it was a SWEAT SHOP and then a SLAUGHTER HOUSE for chickens, yuck – we kept the beams for our water supply and oxygen for bagging fish, plus running heated/de-gassed tank-change water, and a master air-line gang-way for running hundreds of little valves off of for all of the little bubblers etc.

But yeah what I did with it MYSELF, was to support some house plants. And this one Munstera got HUGE – it sent out aerial roots, if you know Munstera you know the type I mean – but THESE ones got long enough that not only did they hang down the nine-ten feet to drink from a puddle on the ground beneath it (how did it know there was a puddle there?) which pooled on the polished concrete floor, from leaking tanks, over-spills from the automated tank over-flow water-change system (tanks were individual, and what looked like the typical system where everything’s on a loop, was simply a fill line from huge tanks in the back, run with big pumps only during water changes, and the over-flow went directly to the drains. Which were typically blocked up and one such drain which had been permanently blocked by our swimming-pool canister type “Sand-Filter” from our Koi pond system (several ponds ganged together on one filter) had a huge cray-fish living at the bottom of it, as though the building itself were a concrete island with a lake or ocean below it, and drain pipes more like tunnels carved by urchins or other such burrowing creatures … such was the ecosystem of the place!)

Anyway yeah, that Munstera plant threw out aerial roots that first reached the puddle on the floor, but then I began to wrap ’em around the wooden beams to keep ’em out of the way, and they kept growing down and down – once they’d got a taste of the mineral-rich water down at the bottom there was no stopping ’em! And I kept looping ’em over and over, they kept growing until this became a semi-daily task, where the roots would grow more than ten inches in one night! INSANE house-plants.

But the best of ’em all, was a 30ft Ficus tree. I had been keeping my Knight anoles in ficus trees from the very beginning, and they’d laid their eggs in the pot at the bottom, whereupon they hatched out better than any other time when I tried to incubate ’em artificially.

Will the Introduced Brown Anole Doom the Native Skink of Bermuda?

AA regular James Stroud aims to find out. The following is taken from the FIU (Florida International University) News:

FIU biology student James Stroud has observed a non-native species of lizard in Bermuda, a potential problem for the island’s critically endangered Bermuda skink.

A two-year conservation project studying the island’s lizard populations led to the discovery of the Cuban brown anole, a species once rumored to inhabit the North Atlantic island, but was never verified until now.

Left to right: Mark Outerbridge (Department of Conservation, Bermuda), Sean Giery and James Stroud pose in Nonsuch Island, one of Bermuda's premier protected areas that supports the Bermuda skink.

“The Cuban brown anole most likely reached Bermuda by human transport,” said Stroud, a Ph.D. student in theKenneth Feeley Lab. “These lizards hitch rides between ports as unintended stowaways amongst cargo, usually in nursery plants and building materials. Although further research is needed to confirm it, this route of introduction seems likely.”

The introduction of the Cuban anole could pose difficulties for the endangered Bermuda skink, the island’s only native lizard species. Also known as a rock lizard, the skink is listed as critically endangered in the International Union for Conservation of Nature’s (IUCN’s) Red List, the world’s authority on the conservation status of plant and animal species. According to the researchers, Cuban brown anoles excel at thriving outside of their native geographical area. The lizards can live in a variety of natural and human-made habitats, and feed on a variety of prey, potentially putting them at an advantage to other lizard species who might not be as tolerant.

The Cuban brown anole was recently confirmed to live in Bermuda by FIU biology Ph.D. student James Stroud. Photo by James Stroud

“We have discovered that the Cuban brown anole does not yet overlap its distribution with the Bermuda skink,” Stroud said. “Therefore, the potential effects of the non-native brown anole on the native Bermuda skink are currently unknown. This topic forms part of our ongoing research interests in Bermuda.”

After surveying all of Bermuda, Stroud found populations of the Cuban lizard at all life stages indicating they are thriving in the central part of the island. He also found the established Jamaican anole continues to be found all over the island, but the Antiguan anole has significantly expanded into areas where the Barbadian lizards live. The discovery was made alongside former FIU doctoral student Sean Giery and Bermuda’s Department of Conservation Services.

Originating in Cuba and the Bahamas, the Cuban brown anole is one of the most widespread lizards outside of its native area with large populations found from Florida to Texas, California, Hawaii, Costa Rica, Singapore and Taiwan. Cuban brown anoles can be found in urban environments including downtown Miami and natural environments such as the Everglades. Anoles are very diverse group of lizards and about 372 species are currently known to exist.

Stroud recently traveled to Costa Rica where he conducted the first-ever study of the Cuban brown anole’s ecology and distribution in the Central American country. He is devoting his doctoral research to studying the evolution, interactions and community patterns of Anolis lizards in the tropics.

Another Anole-Themed Wedding

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Two years ago, we reported on a lovely wedding cake with green anole atop, from the nuptial festivities of Alex Gunderson and his wife Katie. Now word comes to us of another anole wedding. AA correspondent Kristin Winchell, who doubles as a grad student in Liam Revell’s lab, was married to Jonathan Zschau this past September on Nantucket Island. As the photo above attests, the wedding cake was tastefully adorned with a bride, a groom, and an anole.

Actually, it was a double wedding. A photo of the second bride, Ms. Ann Ole, is pictured below (made by the groom’s aunt).

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Third Specimen of Anolis toldo Discovered

Anolis toldo. Photo by Luis Diaz.

Anolis toldo. Photo by Luis Diaz.

Luis Diaz reported on Facebook the discovery of the lizard shown above. He reports: “Anolis toldo, adult female; third individual of the species known and first specimen in the National Museum of Natural History of Cuba. The discovery of this specimen was a result of the joint expedition by the National Museum of Natural History of Cuba and the American Museum of Natural History. It was found on October 19, 2015, at night, on a tree fern in a new location (outside the only known: the plateau of El Toldo ). This is one of the few photos of the species.” The photo was tagged aat Alejandro de Humboldt National Park.

Anoles in Texas!

It’s just come to AA‘s attention that the University of Texas School of Journalism posted an article on invasive anoles in Texas, featuring Yoel Stuart. Check out the article online, and the nifty, albeit chameleon-tainted, poster below.

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Don’t Mess with a Green Lizard

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I’m sure there’s a story behind this photo circulating on Facebook, but I don’t know what it is. Anyone care to speculate?

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